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ImageJ
ImageJ 1.46f
Your rating: Now say why...

(5) 3.85

Scriptable Java app for scientific image processing and analysis.   Updater
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    1.6 MB
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    Wayne Rasband
ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. Downloadable distributions are available for Mac OS, Mac OS X and Linux.

It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw". It supports "stacks", a series of images that share a single window. It is multithreaded, so time-consuming
What's New
Version 1.46f:
  • Michael Schmid contributed an improved Curve Fitter.
  • Built in Joachim Walter's Sync Windows plugin as the Analyze>Tools>Synchronize Windows command.
  • Thanks to Denny Hugg, ImageJ uses a custom crosshair cursor if there is a GIF image named "crosshair-cursor.gif" in the ImageJ/images folder. There is an example custom cursor at imagej.nih.gov/ij/images/crosshair-cursor.gif.
  • With hyperstacks, the Image>Stacks>Delete Slice command can delete the current channel, slice or frame.
  • Michael Schmid added support for I420, YV12 (a.k.a. IYUV), NV12 and NV21 formats to the AVI Reader.
  • The GifWriter now uses ImageIO to save single images.
  • Thanks to Norbert Vischer, fixed a bug that made it impossible to select an image with a duplicate name from the Window menu.
  • Thanks to Michael Schmid, added the IJ.d2s(n,significantDigits,maxDigits) method, which is used by the macro language to convert numbers to strings, by Analyze>Histogram to display values in histogram windows, and by ImageJ to display values in the status bar as the curser is moved over float images.
  • Replaced the SocketListener class with Johannes Schindelin's RMI-based OtherListener class from Fiji, which works on multi-user machines and is more secure.
  • Thanks to David M. Gauntt, added the FHT(ImageProcessor,boolean) constructor to the FHT class.
  • Thanks to Denny Hugg, fixed a bug that caused File>Save As>Gif to create GIF images that would not work as custom cursors.
  • Thanks to Gilles Carpentier, fixed a bug that cuased Image>Stacks>Z Project to throw an exceptions if no image window was open.
  • Thanks to Wilhelm Burger, fixed a bug that caused the Image>Adjust>Canvas Size command to not properly repositioned overlays.
  • Thanks to Christopher Harrison, fixed a bug that caused LUTs to be improperly applied to "Grayscale" mode composite images.
  • Fixed a bug that caused Analyze>Plot Profile to not work with rectangular selections containing NaN values.
Version 1.46f:
  • Michael Schmid contributed an improved Curve Fitter.
  • Built in Joachim Walter's Sync Windows plugin as the Analyze>Tools>Synchronize Windows command.
  • Thanks to Denny Hugg, ImageJ uses a custom crosshair cursor if there is a GIF image named "crosshair-cursor.gif" in the ImageJ/images folder. There is an example custom cursor at more...
Requirements
PPC / Intel, Mac OS X 10.5 or later


Related Links
Full version available here
Plugins for ImageJ are available here







  • CoLocalizer Pr...
    +1
    Commercial $449
    Scientific calculator of ...
ImageJ User Discussion (Write a Review)
ver. 1.x:
(5)
Your rating: Now say why...
Overall:
(5)

sort: smiles | time
burypromote
+1

+25

nargot reviewed on 21 Aug 2011
perfect software for all.

from the scientist POV imagej allows us to handle, process and analyse microscope data without the need for prohibitably expensive and sometimes unstable software.

for the non-scientist it can be used for all your image needs including scripting for batch processing.
[Version 1.45m]

1 Reply

burypromote
-1

-70
Holypoly replied on 13 Nov 2011
PWNED
burypromote
-20

-21

Spiralsteps reviewed on 26 Nov 2010
Perhaps the most hideously designed software ever written.
[Version 1.44j]

3 Replies

burypromote
+6

+8
Germ65 replied on 03 Jan 2011
Just had to reply to this terribly misguided opinion from Spiralsteps. ImageJ is quite simply one of the best pieces of software available.
burypromote
+5

+27
Vitaly replied on 11 Mar 2011
nonsense. very nice software, which is used a lot for image analysis in my lab
burypromote
+2

+25
nargot replied on 21 Aug 2011
it is actually vital software for scientists. its free, scriptable and handles all our obscure file formats (with help from the community)

it may not be totally user friendly however, it is extremely important for us
burypromote

+480
Negritude tipped on 23 Aug 2010
You can't actually download 1.44f directly. Use the instructions at the following link to upgrade your copy:

http://rsb.info.nih.gov/ij/upgrade/
[Version 1.44f]


burypromote

+27
Vitaly commented on 27 Feb 2010
actually, the downloaded version is Version 1.43r already.
[Version 10.2]


burypromote
+2

+2

ThanosD reviewed on 17 Apr 2008
Excellent work in the public domain. This is the kind of tool you NEED when you are in image processing and want to analyze a new type of image. This saves time and resources, since it provides all functionality I would usually find in either expensive image processing suites or environments, such as Matlab. Congrats to the developers!
[Version 1.4d]


burypromote
-3

+67
Tomis commented on 29 Jul 2006
I found it to be extremely buggy. It wasn't able to access an image on the clipboard at all when no other Mac app had a problem with the clipboard image.

Then when opening a JPEG of aprox. 2500x1900 it threw an out of memory error, which is an absolute joke on a 768MB system that had 160MB free at the time. Considering Preview.app opened the same image flawlessly, what gives?

I would give it thumbs down. Maybe wait until they do a Cocoa/Java port? Who knows. It just doesn't feel very polished at this point.
[Version 1.3.7m]

1 Reply

burypromote
+3

+4
someone replied on 16 Aug 2006
Cocoa/Java is deprecated in Tiger. Also, one of the biggest advantage of ImageJ is its cross platform nature. Porting it to Cocoa would mean it will no longer be cross platform.

As for the out of memory problem, you need to increase the heap size of the Java VM in order to be able to open large files. There is a setting in ImageJ for this.
burypromote
+1


Anonymous reviewed on 10 Nov 2004
Thanks for this Java program. It's easy to use and it's fast.
[Version 1.33p]


burypromote
+1


Anonymous reviewed on 30 Apr 2004
Madena is much better. More controls, better interface, faster and the same price (Free).

Still ImageJ might have its uses (primarilly if you are operating on a cross plaform basis). Either provide control and manipulation of 16-bit level data in either TIFF or DICOM files. Something GIMP can NOT do.
[Version 1.32i]

3 Replies

burypromote
+1

Anonymous commented on 13 May 2004
Huge list of bugfixes from 1.32i that I have used for about a week. In that time I've written a couple of plugins to test out some image processing concepts... REMARKABLY easy despite never having written in Java (or C, for that matter) before.

Don't let a simplistic "X is better" deter you if ImageJ looks useful for your purposes. This ain't perfect (I don't see a bugfix for a way that I crashed my version and some Mac-isms don't work right) but it has a very short learning curve to be very useful.
burypromote
-1

Anonymous commented on 01 Feb 2005
To the guy in La-La land: You realize Madena is some 20 MBs, as opposed to ImageJ's less than 1 MB, right?
burypromote
+1

Anonymous commented on 11 Apr 2005
I guess some people read the first sentence and make a conclusion. 20MB with demo images and only 3MB without.
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Downloads:54,757
Version Downloads:50
Type:Multimedia & Design : Author Tools
License:Updater
Date:05 Feb 2012
Platform:PPC / Intel
Price:Free0.00
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ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. Downloadable distributions are available for Mac OS, Mac OS X and Linux.

It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw". It supports "stacks", a series of images that share a single window. It is multithreaded, so time-consuming operations such as image file reading can be performed in parallel with other operations.

It can calculate area and pixel value statistics of user-defined selections. It can measure distances and angles. It can create density histograms and line profile plots. It supports standard image processing functions such as contrast manipulation, sharpening, smoothing, edge detection and median filtering.

It does geometric transformations such as scaling, rotation and flips. Image can be zoomed up to 32:1 and down to 1:32. All analysis and processing functions are available at any magnification factor. The program supports any number of windows (images) simultaneously, limited only by available memory.

Spatial calibration is available to provide real world dimensional measurements in units such as millimeters. Density or gray scale calibration is also available.

ImageJ was designed with an open architecture that provides extensibility via Java plugins. Custom acquisition, analysis and processing plugins can be developed using ImageJ's built in editor and Java compiler. User-written plugins make it possible to solve almost any image processing or analysis problem.

ImageJ is being developed on Mac OS X using its built in editor and Java compiler, plus the BBEdit editor and the Ant build tool. The source code is freely available. The author, Wayne Rasband, is at the Research Services Branch, National Institute of Mental Health, Bethesda, Maryland, USA.
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