CellProfiler is free, open-source software for quantitative analysis of biological images. No prior experience in programming or computer vision is required - this page is intended to help you get up and running.
Load an example CellProfiler pipeline, a series of image-processing modules
Adjust the settings to measure the phenotypes of interest in your images
Process images automatically - even millions
Export your data to a spreadsheet or database
Explore your data and classify complex or subtle phenotypes using machine learning in CellProfiler Analyst
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