PatMinr
Extract all substring repetitions in a given sequence.
Free
PatMinr overview
PatMinr features four different state-of-the-art algorithms to extract all substring repetitions in a given sequence of characters. The four methods are the following:
- BiDESt is an adaptation of the BIDE method (Wang et al., 2003) for substring pattern mining.
- BiDEStOn is a new online version of BiDESt, specifically developed for PatMinr.
- UkkoClos constructs a suffix tree (Ukkonen, 1995) and selects the closed patterns from the tree.
- ClosUkko is a brand new approach that is faster than the three other methods in some cases. (Scientific paper currently under review)
What’s new in version 0.2
Updated on May 18 2017
Version 0.2:
- New, optimized, versions of the pattern analysis algorithms
- Clearer representation of the resulting pattern tree
Information
App requirements
- Intel 64
- OS X 10.11 or later
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