Jmol

Name: Jmol
Rating: 5 (5 reviews)

14.29.54

10 October 2019

Molecule viewer for students/educators/researchers.

Overview

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.

Cross-platform, running on Windows, OS X, and Linux/Unix systems.
The JmolApplet is a Web browser applet that can be integrated into Web pages.
The Jmol application is a standalone Java application that runs on the desktop.
The JmolViewer is a development tool kit that can be integrated into other Java applications.

Version 14.29.54:

Bug fix: show chemical image has colored background
New feature: ELLIPSOID ID xx axes [...] [...] [...]
New feature: ELLIPSOID ID xx axes [ [...][...][...] ]
New feature: ELLIPSOID ID xx axes [ pt pt pt ]
New feature: ELLIPSOID ID xx axes matrix3f
New feature: ELLIPSOID ID xx scale [ a b c ]
New feature: ELLIPSOID ID xx scale pt
New feature: set macroDirectory [default: https://chemapps.stolaf.edu/jmol/macros]
Holds macros.json, which points to macro files
No longer hard-coded into Jmol
New feature: adds MACRO topond
New feature: adds MACRO crystal
New feature: adds MACRO topology
New feature: adds filter "topos" to load command to allow for hypothetical unit cells with dimension a=1.
Bug fix: symop(@1,@2,"matrix") should give an array of matricies, one for each relevant operation
Bug fix: print (-0.0001).format("%3.2f") should print 0.00, not -0.00
Bug fix: CRYSTAL reader fixes for TOPOND output
Bug fix: MOLDEN fix for allowing beta set to start with (nCoef + 1)