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Patrick G. Meirmans
GenoDive is a user-friendly program to perform population genetics analyses. It features an intuitive and clutter-free user-interface, behind which lie powerful statistical tools. The program features several analyses that are not available in other programs such as AMOVA-based k-means clustering, standardised coefficients of population differentiation, tests for clonal reproduction and AMOVA's for polyploid data. GenoDive can handle genetic data as well as distance matrices and ecological data, enabling you to combine data from several different sources into a single analysis. Best of
What's New
Version 2.0b25:
- Stopped support for OS X 10.4 Tiger and 10.5 Leopard; GenoDive now requires OS X 10.6 Snow Leopard or later. As a side-effect, GenoDive no longer runs on computers with a PowerPC processor.
- Drastically improved performance with large datasets by showing only a subset of the loci in the Matrix View.
- Switched to different random-number generator.
- Fixed bug in PCA that occurred with datasets with lots of invariable loci.
- Fixed bug in Spatial Autocorrelation that occurred when using the average value instead of Mantel's
r. - No longer tries to reopen previous windows on OS X 10.7 Lion and 10.8 Mountain Lion.
Version 2.0b25:
- Stopped support for OS X 10.4 Tiger and 10.5 Leopard; GenoDive now requires OS X 10.6 Snow Leopard or later. As a side-effect, GenoDive no longer runs on computers with a PowerPC processor.
- Drastically improved performance with large datasets by showing only a subset of the loci in the Matrix View.
- Switched to different random-number generator.
- Fixed more...
Requirements
Intel, OS X 10.6 or later
Intel, OS X 10.6 or later
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GenoDive is a user-friendly program to perform population genetics analyses. It features an intuitive and clutter-free user-interface, behind which lie powerful statistical tools. The program features several analyses that are not available in other programs such as AMOVA-based k-means clustering, standardised coefficients of population differentiation, tests for clonal reproduction and AMOVA's for polyploid data. GenoDive can handle genetic data as well as distance matrices and ecological data, enabling you to combine data from several different sources into a single analysis. Best of all, GenoDive works on a Mac!
A beta version of the program is now available. This means that the program will still contain bugs, and some analyses are not yet fully implemented. If you use this beta version, you are bound by honour to report any issues, bugs, or praise that you may have to the author.
A beta version of the program is now available. This means that the program will still contain bugs, and some analyses are not yet fully implemented. If you use this beta version, you are bound by honour to report any issues, bugs, or praise that you may have to the author.
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Drnash reviewed on 31 Oct 2013