JERRY JONES  The reason they are out of order is because of a new form of copy protection that the film industry has introduced. It forces the computer to read the disc and show dozens of different titles only one of which is the actual movie in the proper sequence. Most programs automatically rip the longest video which will always be a wrong file. What you need to do is open the dvd in the dvd player or any other app that plays the actual disc and then choose to play the movie and take note of which title the program is playing. When you go back to rip choose that title and you will have a good copy of the movie you want. Mostly I have noticed that this happens with Paramount or Dreamworks films.  
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