THEBRIX2008 Transmission is production but muTorrent is beta ... and it shows.
I agree with others regarding transmission speed, which is significantly superior under muTorrent with my connection. However, after that it is downhill; the muTorrent user interface is more obviously "Mac-like" but, surprisingly, is much less effective at presenting information because there is a lot of white space and a lot of cramped text, whereas Transmission barely has a wasted pixel. And there is significant functionality in Transmission not present in muTorrent, most notably the blocklist of bad clients and the Web interface.
Finally, I am surprised at the elementary mistake of not setting up the file association (so it is not possible to click on a .torrent in Finder and automatically load it into muTorrent); that should have been caught during alpha testing.
(Version 0.9.0.1b)