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DESCRIPTION
CLC RNA Workbench - A bioinformatics program for advanced RNA sequence analysis. All analyses are fully integrated in one single, user-friendly, and intuitive software application. Some analyses are:
  • Secondary structure prediction
  • Graphical view and editing of secondary structure
  • Tabular view of structures and energy contributions
  • Symbolic representation in sequence view
  • Pattern search
  • BLAST searches
  • General sequence analyses
  • Nucleotide analyses
  • Sequence alignment
  • Dot plots
  • Virtual gel viewer
WHAT'S NEW
Version 4.2:

New features:

  • Import list of sequences in csv format: each line in the file represents a sequence with name, optional description, and sequence. Typically useful for importing lists of oligos.
  • Advanced view of elements in a folder including batch editing.
  • Extract sequences improvements
  • You can now drag results from NCBI searches into the view area to open directly (previously you could only drag into a folder to save)
  • "Find" in text view now accepts Enter as command to find the next hit
  • Importing VectorNTI archives previously resulted in a sequence list. Now it imports as single sequences.
  • Export of annotations in GFF format (note that annotations with joined regions are not supported)

Bug fixes:

  • Fixed tblastn numbering issue
  • Problem rendering scatter plots without lines
  • DNA strider files could loose name upon import
  • Rare misplacement of annotations when editing very large sequences
  • Various bug-fixes

This update is recommended for all users.

REQUIREMENTS
Mac OS X 10.4 or later.

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SCREENSHOT

Developer:CLC bio A/S
Downloads:2,521
  - Version d/l:237
Education:Science
License:Demo
Date:18 Aug 2009
Platform:PPC/Intel
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