DESCRIPTION
CLC RNA Workbench - A bioinformatics program for advanced RNA sequence analysis. All analyses are fully integrated in one single, user-friendly, and intuitive software application.
Some analyses are:
- Secondary structure prediction
- Graphical view and editing of secondary structure
- Tabular view of structures and energy contributions
- Symbolic representation in sequence view
- Pattern search
- BLAST searches
- General sequence analyses
- Nucleotide analyses
- Sequence alignment
- Dot plots
- Virtual gel viewer
WHAT'S NEW
Version 4.2: New features:
- Import list of sequences in csv format: each line in the file represents a sequence with name, optional description, and sequence. Typically useful for importing lists of oligos.
- Advanced view of elements in a folder including batch editing.
- Extract sequences improvements
- You can now drag results from NCBI searches into the view area to open directly (previously you could only drag into a folder to save)
- "Find" in text view now accepts Enter as command to find the next hit
- Importing VectorNTI archives previously resulted in a sequence list. Now it imports as single sequences.
- Export of annotations in GFF format (note that annotations with joined regions are not supported)
Bug fixes:
- Fixed tblastn numbering issue
- Problem rendering scatter plots without lines
- DNA strider files could loose name upon import
- Rare misplacement of annotations when editing very large sequences
- Various bug-fixes
This update is recommended for all users.
REQUIREMENTS
Mac OS X 10.4 or later.
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