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AlleleID is a comprehensive desktop tool designed to address the challenges of pathogen detection, bacterial identification or taxa/species discrimination using microarrays and TaqMan and molecular beacon qPCR assays. With ClustalW multiple sequence alignment at its core, AlleleID can design species specific/cross species probes for microarrays or TaqMan/molecular beacon qPCR assays. You could use both the techniques; verify microarray results using qPCR, or perhaps, make microarrays based on probes through qPCR.

This application is not free. Pricing is provided by quote, which can be generated more...

What's New

Version 7.82:
  • Latest changes to the genomic databases of NCBI-BLAST along with fixes to reported problems are accommodated in this version.


  • OS X 10.4.7 or later

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Current Version (7.x)


Downloads 4,149
Version Downloads 102
License Updater
Date 19 Jun 2014
Platform Intel 64 / OS X / PPC 32 / Intel 32
Price Free
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